Transcript: FAM172A-001 OTTHUMT00000254100.3

Description

family with sequence similarity 172, member A

Location

Chromosome 5: 93,618,069-94,111,635 reverse strand.

About this transcript

This transcript has 11 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000131329 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
FAM172A-001	OTTHUMT00000254100.3	4312	416aa	OTTHUMP00000162006	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4069	Q8WUF8
FAM172A-006	OTTHUMT00000369882.1	1387	306aa	OTTHUMP00000222441	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54879	-
FAM172A-005	OTTHUMT00000369881.1	1369	370aa	OTTHUMP00000222440	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54880	-
FAM172A-007	OTTHUMT00000369883.1	1031	269aa	OTTHUMP00000222442	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
FAM172A-002	OTTHUMT00000369878.1	1392	305aa	OTTHUMP00000222439	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
FAM172A-008	OTTHUMT00000369884.1	803	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
FAM172A-004	OTTHUMT00000369880.2	965	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
FAM172A-010	OTTHUMT00000369886.1	557	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
FAM172A-011	OTTHUMT00000369887.1	310	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 4,312 bps Translation length: 416 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4069

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 09/12/2005)

Alternative symbols

AC106818.2-001

Remarks

DKFZp564D172

Other assemblies

This transcript maps to 93,618,069-94,111,635 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000395965

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: FAM172A-001 OTTHUMT00000254100.3

Summary

Transcript-based displays