Transcript: TEX9-002 OTTHUMT00000418847.3

Description

testis expressed 9

Location

Chromosome 15: 56,365,447-56,398,341 forward strand.

About this transcript

This transcript has 8 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000132035 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
TEX9-003	OTTHUMT00000418844.1	1768	316aa	OTTHUMP00000248563	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS66776
TEX9-001	OTTHUMT00000255048.2	1433	391aa	OTTHUMP00000162908	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10157
TEX9-002	OTTHUMT00000418847.3	4440	208aa	OTTHUMP00000248565	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
TEX9-010	OTTHUMT00000431907.1	2297	283aa	OTTHUMP00000254236	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
TEX9-007	OTTHUMT00000418850.2	2005	102aa	OTTHUMP00000248566	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
TEX9-006	OTTHUMT00000418843.2	689	104aa	OTTHUMP00000248562	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TEX9-009	OTTHUMT00000418845.1	687	79aa	OTTHUMP00000248564	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
TEX9-004	OTTHUMT00000418848.1	537	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-
TEX9-005	OTTHUMT00000418849.1	632	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 8 Transcript length: 4,440 bps Translation length: 208 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 30/06/2011)

Alternative symbols

AC084782.1-002

Other assemblies

This transcript maps to 56,365,447-56,398,341 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000558083

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TEX9-002 OTTHUMT00000418847.3

Summary

Transcript-based displays