Transcript: EPG5-009 OTTHUMT00000445080.1

Description

ectopic P-granules autophagy protein 5 homolog (C. elegans)

Location

Chromosome 18: 45,847,609-45,867,750 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000132626 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
EPG5-001	OTTHUMT00000445081.1	12633	2579aa	OTTHUMP00000260815	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11926	Q9HCE0
EPG5-009	OTTHUMT00000445080.1	6375	505aa	OTTHUMP00000260814	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7ENS1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
EPG5-006	OTTHUMT00000445086.1	4232	336aa	OTTHUMP00000260818	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
EPG5-004	OTTHUMT00000445084.1	3999	856aa	OTTHUMP00000260816	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
EPG5-005	OTTHUMT00000445085.1	3767	657aa	OTTHUMP00000260817	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
EPG5-002	OTTHUMT00000445083.1	4348	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
EPG5-008	OTTHUMT00000445082.1	637	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
EPG5-007	OTTHUMT00000445089.1	537	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
EPG5-010	OTTHUMT00000445087.1	451	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
EPG5-003	OTTHUMT00000445088.1	4457	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 6,375 bps Translation length: 505 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 10/02/2012)

Alternative symbols

RP11-24L5.2-009

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 45,847,609-45,867,750 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000590854

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: EPG5-009 OTTHUMT00000445080.1

Summary

Transcript-based displays