Transcript: COL3A1-004 OTTHUMT00000334710.3

Description

collagen, type III, alpha 1

Location

About this transcript

This transcript has 5 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COL3A1-001	OTTHUMT00000255899.3	5543	1466aa	OTTHUMP00000163485	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2297	P02461
COL3A1-004	OTTHUMT00000334710.3	268	90aa	OTTHUMP00000207314	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
COL3A1-007	OTTHUMT00000313500.1	3880	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
COL3A1-002	OTTHUMT00000313498.1	2054	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
COL3A1-003	OTTHUMT00000313499.1	628	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
COL3A1-005	OTTHUMT00000334711.1	226	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 268 bps Translation length: 90 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 26/08/2008)

Alternative symbols

AC066694.1-004

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 188,991,674-188,994,308 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000450867

Curation Method

Manual annotation from Havana