Transcript: TGM4-003 OTTHUMT00000343891.1

Description

transglutaminase 4 (prostate)

Location

Chromosome 3: 44,874,635-44,901,570 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000133096 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
TGM4-001	OTTHUMT00000256755.2	3388	684aa	OTTHUMP00000164127	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2723	P49221
TGM4-002	OTTHUMT00000343890.2	2307	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TGM4-003	OTTHUMT00000343891.1	641	91aa	OTTHUMP00000209750	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WCU8
TGM4-009	OTTHUMT00000343897.1	137	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TGM4-004	OTTHUMT00000343892.1	1746	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TGM4-008	OTTHUMT00000343896.1	707	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TGM4-007	OTTHUMT00000343895.1	544	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 641 bps Translation length: 91 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 17/12/2008)

Alternative symbols

AC098649.3-003

Other assemblies

This transcript maps to 44,874,635-44,901,570 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000627547 ENST00000422219

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TGM4-003 OTTHUMT00000343891.1

Summary

Transcript-based displays