Transcript: MMP2-005 OTTHUMT00000433263.2

Description

matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)

Location

Chromosome 16: 55,505,375-55,506,239 forward strand.

About this transcript

This transcript has 2 exons.

Gene

This transcript is a product of gene OTTHUMG00000133202 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
MMP2-001	OTTHUMT00000256913.3	3741	660aa	OTTHUMP00000164261	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10752	A0A024R6R4
MMP2-008	OTTHUMT00000440029.1	3235	584aa	OTTHUMP00000258222	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76869	-
MMP2-003	OTTHUMT00000433261.1	2469	610aa	OTTHUMP00000254842	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45487	-
MMP2-002	OTTHUMT00000433260.1	1978	584aa	OTTHUMP00000254841	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76869	-
MMP2-006	OTTHUMT00000433262.3	755	251aa	OTTHUMP00000254843	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BS34	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
MMP2-004	OTTHUMT00000433259.2	736	201aa	OTTHUMP00000254840	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BR66	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
MMP2-007	OTTHUMT00000433258.2	566	118aa	OTTHUMP00000254839	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BV48	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
MMP2-005	OTTHUMT00000433263.2	443	22aa	OTTHUMP00000259065	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 2 Transcript length: 443 bps Translation length: 22 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 06/09/2011)

Alternative symbols

AC007336.2-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 55,505,375-55,506,239 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000566564

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: MMP2-005 OTTHUMT00000433263.2

Summary

Transcript-based displays