Transcript: APPL1-001 OTTHUMT00000258196.2

Description

adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1

Location

Chromosome 3: 57,227,737-57,273,468 forward strand.

About this transcript

This transcript has 22 exons and is annotated with 19 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000133756 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
APPL1-001	OTTHUMT00000258196.2	6058	709aa	OTTHUMP00000165214	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2882	Q9UKG1
APPL1-002	OTTHUMT00000258197.2	516	133aa	OTTHUMP00000165215	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
APPL1-008	OTTHUMT00000351451.8	396	114aa	OTTHUMP00000213144	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
APPL1-009	OTTHUMT00000398787.1	1502	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
APPL1-005	OTTHUMT00000351448.1	2217	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
APPL1-003	OTTHUMT00000258198.1	886	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
APPL1-004	OTTHUMT00000258199.1	728	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
APPL1-006	OTTHUMT00000351449.1	545	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
APPL1-007	OTTHUMT00000351450.1	419	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 22 Transcript length: 6,058 bps Translation length: 709 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2882

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 03/04/2006)

Alternative symbols

AC093928.3-001

Other assemblies

This transcript maps to 57,227,737-57,273,468 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000288266

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: APPL1-001 OTTHUMT00000258196.2

Summary

Transcript-based displays