Transcript: CDH16-009 OTTHUMT00000421381.3

Description

cadherin 16, KSP-cadherin

Location

Chromosome 16: 66,913,185-66,916,396 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000137518 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CDH16-001	OTTHUMT00000268839.2	2954	829aa	OTTHUMP00000174814	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10823	O75309
CDH16-002	OTTHUMT00000268840.1	2821	807aa	OTTHUMP00000174815	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS56002	-
CDH16-006	OTTHUMT00000421378.1	2694	790aa	OTTHUMP00000249751	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58471	-
CDH16-004	OTTHUMT00000421376.1	2526	732aa	OTTHUMP00000249749	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58472	-
CDH16-007	OTTHUMT00000421377.1	2604	749aa	OTTHUMP00000249750	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BSG2
CDH16-009	OTTHUMT00000421381.3	715	238aa	OTTHUMP00000256744	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	I3L418	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
CDH16-008	OTTHUMT00000421382.2	582	124aa	OTTHUMP00000259129	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QLA1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CDH16-003	OTTHUMT00000421379.1	3539	175aa	OTTHUMP00000249752	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0B4J288
CDH16-005	OTTHUMT00000421380.1	2026	248aa	OTTHUMP00000249753	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BSV3

Summary

Statistics

Exons: 5 Transcript length: 715 bps Translation length: 238 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 28/07/2011)

Alternative symbols

AC009084.7-009

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 66,913,185-66,916,396 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000567009

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CDH16-009 OTTHUMT00000421381.3

Summary

Transcript-based displays