Transcript: SYNGAP1-004 OTTHUMT00000276514.1

Description

synaptic Ras GTPase activating protein 1 homolog (rat)

Location

Chromosome 6-SSTO: 4,805,702-4,837,830 forward strand.

About this transcript

This transcript has 20 exons and is annotated with 32 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000140176 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SYNGAP1-001	OTTHUMT00000276511.2	5916	1343aa	OTTHUMP00000178742	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q96PV0
SYNGAP1-004	OTTHUMT00000276514.1	4601	1299aa	OTTHUMP00000178744	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SYNGAP1-003	OTTHUMT00000276513.1	4339	1284aa	OTTHUMP00000178743	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SYNGAP1-006	OTTHUMT00000315690.2	1461	487aa	OTTHUMP00000195951	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140T8W4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SYNGAP1-002	OTTHUMT00000276512.1	2061	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYNGAP1-007	OTTHUMT00000315691.1	479	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYNGAP1-005	OTTHUMT00000315689.1	260	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYNGAP1-008	OTTHUMT00000315692.1	394	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 20 Transcript length: 4,601 bps Translation length: 1,299 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/04/2011 (Created on 23/08/2006)

Alternative symbols

DASS-97D12.6-004

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 33,560,455-33,592,583 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000395071

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SYNGAP1-004 OTTHUMT00000276514.1

Summary

Transcript-based displays