Transcript: TRAPPC6B-007 OTTHUMT00000410203.1

Description

trafficking protein particle complex 6B

Location

Chromosome 14: 39,150,118-39,170,353 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000140259 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TRAPPC6B-002	OTTHUMT00000276775.1	3242	158aa	OTTHUMP00000178905	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41947	Q86SZ2
TRAPPC6B-001	OTTHUMT00000276774.2	3229	130aa	OTTHUMP00000178904	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9670	-
TRAPPC6B-006	OTTHUMT00000410204.2	541	102aa	OTTHUMP00000244309	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
TRAPPC6B-007	OTTHUMT00000410203.1	1000	50aa	OTTHUMP00000244308	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TRAPPC6B-005	OTTHUMT00000410205.1	664	50aa	OTTHUMP00000244310	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TRAPPC6B-004	OTTHUMT00000410202.1	870	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TRAPPC6B-003	OTTHUMT00000331444.1	4533	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,000 bps Translation length: 50 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 09/03/2011)

Alternative symbols

AL132639.9-007

Other assemblies

This transcript maps to 39,150,118-39,170,353 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000555269

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TRAPPC6B-007 OTTHUMT00000410203.1

Summary

Transcript-based displays