Transcript: WDHD1-005 OTTHUMT00000411298.2

Description

WD repeat and HMG-box DNA binding protein 1

Location

About this transcript

This transcript has 14 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
WDHD1-001	OTTHUMT00000276897.2	5996	1129aa	OTTHUMP00000178995	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9721	O75717
WDHD1-002	OTTHUMT00000318343.6	3722	1006aa	OTTHUMP00000197498	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41955	-
WDHD1-003	OTTHUMT00000318344.5	768	168aa	OTTHUMP00000197499	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
WDHD1-005	OTTHUMT00000411298.2	2348	64aa	OTTHUMP00000244922	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
WDHD1-004	OTTHUMT00000318345.1	696	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 2,348 bps Translation length: 64 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 21/03/2011)

Alternative symbols

AL160471.5-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 54,941,176-54,991,382 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000567693

Curation Method

Manual annotation from Havana