Description
hypoxia inducible factor 3, alpha subunit
Location
Chromosome 19: 46,298,394-46,325,594 forward strand.
About this transcript
This transcript has 11 exons and is annotated with 2 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000141296 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
HIF3A-003 | OTTHUMT00000280556.3 | 5852 | 669aa | OTTHUMP00000180608 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12681 | Q9Y2N7 | |
HIF3A-006 | OTTHUMT00000280559.2 | 2551 | 667aa | OTTHUMP00000180610 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12682 | - | |
HIF3A-007 | OTTHUMT00000384749.1 | 2250 | 600aa | OTTHUMP00000230128 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42580 | - | |
HIF3A-023 | OTTHUMT00000461728.1 | 2101 | 594aa | OTTHUMP00000269452 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
HIF3A-004 | OTTHUMT00000280557.4 | 1709 | 450aa | OTTHUMP00000230131 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
HIF3A-012 | OTTHUMT00000384751.2 | 573 | 148aa | OTTHUMP00000230130 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PLC8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
HIF3A-020 | OTTHUMT00000280552.2 | 2595 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HIF3A-021 | OTTHUMT00000280551.2 | 2432 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HIF3A-022 | OTTHUMT00000461726.1 | 2205 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HIF3A-005 | OTTHUMT00000461730.1 | 2172 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
HIF3A-018 | OTTHUMT00000384750.2 | 1486 | 69aa | OTTHUMP00000230129 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
HIF3A-024 | OTTHUMT00000461727.1 | 576 | 69aa | OTTHUMP00000269451 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
HIF3A-010 | OTTHUMT00000384746.1 | 562 | 81aa | OTTHUMP00000230126 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | E9PNQ7 | |
HIF3A-016 | OTTHUMT00000384756.1 | 544 | 93aa | OTTHUMP00000230133 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
HIF3A-014 | OTTHUMT00000384752.1 | 539 | 69aa | OTTHUMP00000230132 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
HIF3A-013 | OTTHUMT00000384754.2 | 767 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
HIF3A-001 | OTTHUMT00000280554.2 | 2101 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HIF3A-009 | OTTHUMT00000384753.2 | 2101 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HIF3A-002 | OTTHUMT00000280555.3 | 2004 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HIF3A-017 | OTTHUMT00000384757.1 | 1031 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HIF3A-015 | OTTHUMT00000384755.1 | 549 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HIF3A-011 | OTTHUMT00000384748.1 | 507 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
HIF3A-008 | OTTHUMT00000461729.1 | 313 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |