Transcript: ADAMTS17-009 OTTHUMT00000420577.2

Description

ADAM metallopeptidase with thrombospondin type 1 motif, 17

Location

Chromosome 15: 100,051,568-100,109,107 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000149867 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ADAMTS17-001	OTTHUMT00000313595.1	6207	1095aa	OTTHUMP00000194818	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10383	Q8TE56
ADAMTS17-004	OTTHUMT00000417546.2	954	120aa	OTTHUMP00000249374	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ADAMTS17-009	OTTHUMT00000420577.2	643	214aa	OTTHUMP00000249373	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BRA9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
ADAMTS17-002	OTTHUMT00000417545.1	571	68aa	OTTHUMP00000247955	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ADAMTS17-006	OTTHUMT00000417580.2	847	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ADAMTS17-007	OTTHUMT00000417579.1	496	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ADAMTS17-003	OTTHUMT00000417547.1	220	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ADAMTS17-005	OTTHUMT00000417544.1	1964	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ADAMTS17-008	OTTHUMT00000417578.2	1745	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 643 bps Translation length: 214 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 21/07/2011)

Alternative symbols

AC084855.1-009

Annotation Attributes

dotter confirmed [Definitions]

not organism-supported

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 100,051,568-100,109,107 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000568565

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ADAMTS17-009 OTTHUMT00000420577.2

Summary

Transcript-based displays