Transcript: ARSA-007 OTTHUMT00000472283.1

Description

arylsulfatase A

Location

Chromosome 22: 50,622,754-50,625,656 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000150180 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ARSA-001	OTTHUMT00000316725.2	2050	509aa	OTTHUMP00000196544	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14100	P15289
ARSA-005	OTTHUMT00000316729.2	1918	509aa	OTTHUMP00000196548	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14100	P15289
ARSA-004	OTTHUMT00000316728.2	1895	509aa	OTTHUMP00000196547	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14100	P15289
ARSA-003	OTTHUMT00000316727.2	1824	509aa	OTTHUMP00000196546	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS14100	P15289
ARSA-002	OTTHUMT00000316726.1	1650	423aa	OTTHUMP00000196545	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS46736	-
ARSA-007	OTTHUMT00000472283.1	576	69aa	OTTHUMP00000274246	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	V9GYR0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ARSA-008	OTTHUMT00000472282.1	573	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARSA-006	OTTHUMT00000407082.1	1431	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 576 bps Translation length: 69 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 04/06/2013)

Alternative symbols

CTA-384D8.17-007

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 50,622,754-50,625,656 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000608497

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ARSA-007 OTTHUMT00000472283.1

Summary

Transcript-based displays