Transcript: SMYD5-002 OTTHUMT00000318302.1

Description

SMYD family member 5

Location

Chromosome 2: 73,214,238-73,223,106 forward strand.

About this transcript

This transcript has 8 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000150482 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SMYD5-001	OTTHUMT00000318301.1	2593	418aa	OTTHUMP00000197473	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33221	Q6GMV2
SMYD5-004	OTTHUMT00000318304.3	584	138aa	OTTHUMP00000197476	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SMYD5-002	OTTHUMT00000318302.1	786	70aa	OTTHUMP00000197474	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SMYD5-003	OTTHUMT00000318303.1	660	81aa	OTTHUMP00000197475	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
SMYD5-005	OTTHUMT00000318305.1	753	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SMYD5-008	OTTHUMT00000318308.1	566	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SMYD5-006	OTTHUMT00000318306.1	335	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SMYD5-007	OTTHUMT00000318307.1	359	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 786 bps Translation length: 70 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 10/08/2007)

Alternative symbols

AC010913.2-002

Other assemblies

This transcript maps to 73,214,238-73,223,106 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000258100

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SMYD5-002 OTTHUMT00000318302.1

Summary

Transcript-based displays