Transcript: GCAT-003 OTTHUMT00000319508.2

Description

glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase)

Location

Chromosome 22: 37,808,014-37,813,609 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000150664 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GCAT-002	OTTHUMT00000319507.1	1656	445aa	OTTHUMP00000198189	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54527	-
GCAT-001	OTTHUMT00000319506.2	1497	419aa	OTTHUMP00000198188	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13957	O75600
GCAT-003	OTTHUMT00000319508.2	716	239aa	OTTHUMP00000198190	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BZ75	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
GCAT-004	OTTHUMT00000319509.2	583	177aa	OTTHUMP00000198191	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9IZC9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
GCAT-006	OTTHUMT00000319511.2	558	91aa	OTTHUMP00000198193	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
GCAT-005	OTTHUMT00000319510.1	552	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
GCAT-007	OTTHUMT00000319512.1	551	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 716 bps Translation length: 239 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 21/09/2007)

Alternative symbols

Z97630.2-003

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 37,808,014-37,813,609 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000451984

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: GCAT-003 OTTHUMT00000319508.2

Summary

Transcript-based displays