Transcript: NIPSNAP1-005 OTTHUMT00000322121.1

Description

nipsnap homolog 1 (C. elegans)

Location

About this transcript

This transcript has 3 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
NIPSNAP1-001	OTTHUMT00000322117.1	2237	284aa	OTTHUMP00000199702	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS13860	Q9BPW8
NIPSNAP1-002	OTTHUMT00000322118.3	674	75aa	OTTHUMP00000199703	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
NIPSNAP1-003	OTTHUMT00000322119.2	661	221aa	OTTHUMP00000199704	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
NIPSNAP1-007	OTTHUMT00000322123.1	600	128aa	OTTHUMP00000199705	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
NIPSNAP1-004	OTTHUMT00000322120.1	441	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
NIPSNAP1-005	OTTHUMT00000322121.1	586	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 586 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 22/11/2007)

Alternative symbols

CTA-256D12.9-005

Other assemblies

This transcript maps to 29,569,866-29,581,100 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000496944

Curation Method

Manual annotation from Havana