Transcript: USP42-004 OTTHUMT00000324261.2

Description

ubiquitin specific peptidase 42

Location

Chromosome 7: 6,104,950-6,145,575 forward strand.

About this transcript

This transcript has 12 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000151888 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
USP42-005	OTTHUMT00000324262.3	5155	1316aa	OTTHUMP00000225049	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47535	-
USP42-006	OTTHUMT00000324263.3	3611	1043aa	OTTHUMP00000200707	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JPC9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
USP42-008	OTTHUMT00000375774.2	1490	475aa	OTTHUMP00000225050	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E7EWZ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
USP42-002	OTTHUMT00000324259.2	2363	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
USP42-009	OTTHUMT00000375775.1	5017	219aa	OTTHUMP00000225051	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E5RJP3
USP42-004	OTTHUMT00000324261.2	1380	174aa	OTTHUMP00000200706	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	B4DP25
USP42-003	OTTHUMT00000324260.1	520	98aa	OTTHUMP00000200705	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
USP42-007	OTTHUMT00000324264.2	4286	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 1,380 bps Translation length: 174 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 07/02/2008)

Alternative symbols

AC004895.5-004

Other assemblies

This transcript maps to 6,104,950-6,145,575 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000404008

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: USP42-004 OTTHUMT00000324261.2

Summary

Transcript-based displays