Transcript: ARHGEF25-001 OTTHUMT00000326561.1

Description

Rho guanine nucleotide exchange factor (GEF) 25

Location

Chromosome 12: 57,611,435-57,617,243 forward strand.

About this transcript

This transcript has 15 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000152516 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
ARHGEF25-001	OTTHUMT00000326561.1	2552	580aa	OTTHUMP00000201858	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8947	Q86VW2
ARHGEF25-003	OTTHUMT00000326566.1	2246	619aa	OTTHUMP00000201859	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44931	-
ARHGEF25-005	OTTHUMT00000326563.1	2099	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ARHGEF25-006	OTTHUMT00000326562.1	1640	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ARHGEF25-002	OTTHUMT00000326565.1	687	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARHGEF25-004	OTTHUMT00000326567.1	1945	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ARHGEF25-007	OTTHUMT00000335059.1	668	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ARHGEF25-008	OTTHUMT00000335060.1	593	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ARHGEF25-009	OTTHUMT00000335061.1	274	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 2,552 bps Translation length: 580 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8947

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 26/03/2008)

Alternative symbols

AC025165.7-001

Other assemblies

This transcript maps to 57,611,435-57,617,243 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000286494

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ARHGEF25-001 OTTHUMT00000326561.1

Summary

Transcript-based displays