Transcript: UBXN7-001 OTTHUMT00000340938.2

Description

UBX domain protein 7

Location

Chromosome 3: 196,347,662-196,432,474 reverse strand.

About this transcript

This transcript has 11 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000155639 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
UBXN7-001	OTTHUMT00000340938.2	10568	489aa	OTTHUMP00000208358	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43191	O94888
UBXN7-006	OTTHUMT00000340943.2	1173	327aa	OTTHUMP00000208360	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9JAT7
UBXN7-007	OTTHUMT00000340944.2	375	125aa	OTTHUMP00000208361	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
UBXN7-008	OTTHUMT00000340945.2	374	76aa	OTTHUMP00000208362	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
UBXN7-005	OTTHUMT00000340942.1	2225	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
UBXN7-004	OTTHUMT00000340941.1	1996	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
UBXN7-003	OTTHUMT00000340940.1	3158	75aa	OTTHUMP00000208359	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
UBXN7-002	OTTHUMT00000340939.1	921	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 10,568 bps Translation length: 489 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS43191

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 11/11/2008)

Alternative symbols

AC069257.2-001

Other assemblies

This transcript maps to 196,347,662-196,432,474 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000296328

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: UBXN7-001 OTTHUMT00000340938.2

Summary

Transcript-based displays