Transcript: ZKSCAN5-002 OTTHUMT00000345598.1

Description

zinc finger with KRAB and SCAN domains 5

Location

About this transcript

This transcript has 5 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
ZKSCAN5-001	OTTHUMT00000345597.1	4344	839aa	OTTHUMP00000210524	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5667	Q9Y2L8
ZKSCAN5-005	OTTHUMT00000345601.1	4178	839aa	OTTHUMP00000210527	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5667	Q9Y2L8
ZKSCAN5-004	OTTHUMT00000345600.1	3111	839aa	OTTHUMP00000210526	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS5667	Q9Y2L8
ZKSCAN5-003	OTTHUMT00000345599.1	3310	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ZKSCAN5-002	OTTHUMT00000345598.1	5626	222aa	OTTHUMP00000210525	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8WBD4

Summary

Statistics

Exons: 5 Transcript length: 5,626 bps Translation length: 222 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 21/01/2009)

Alternative symbols

GS1-259H13.9-002

Other assemblies

This transcript maps to 99,505,254-99,534,700 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000454175

Curation Method

Manual annotation from Havana