Transcript: GALNT15-004 OTTHUMT00000346720.1

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15

Location

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
GALNT15-001	OTTHUMT00000346483.2	4669	639aa	OTTHUMP00000210949	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33711	Q8N3T1
GALNT15-002	OTTHUMT00000346609.1	2416	617aa	OTTHUMP00000211022	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS82742	C9JGI4
GALNT15-004	OTTHUMT00000346720.1	572	141aa	OTTHUMP00000211084	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
GALNT15-003	OTTHUMT00000346719.1	815	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
GALNT15-005	OTTHUMT00000346721.1	538	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 572 bps Translation length: 141 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 05/02/2009)

Alternative symbols

RP11-608O8.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 16,175,665-16,208,645 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000430410

Curation Method

Manual annotation from Havana