Transcript: PYCRL-002 OTTHUMT00000347082.2

Description

pyrroline-5-carboxylate reductase-like

Location

Chromosome 8: 143,605,547-143,609,773 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000157010 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PYCRL-001	OTTHUMT00000347081.2	2678	286aa	OTTHUMP00000211292	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6407	A0A0A0MQS1
PYCRL-008	OTTHUMT00000476210.1	2332	274aa	OTTHUMP00000275419	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q53H96
PYCRL-004	OTTHUMT00000347084.2	1000	254aa	OTTHUMP00000211293	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
PYCRL-002	OTTHUMT00000347082.2	985	137aa	OTTHUMP00000275513	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B5MD87
PYCRL-007	OTTHUMT00000347087.3	579	59aa	OTTHUMP00000275514	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WTU2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PYCRL-003	OTTHUMT00000347083.2	1123	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PYCRL-005	OTTHUMT00000347085.3	1324	44aa	OTTHUMP00000211294	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PYCRL-006	OTTHUMT00000347086.1	830	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 985 bps Translation length: 137 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 11/02/2009)

Alternative symbols

RP11-661A12.2-002

Other assemblies

This transcript maps to 143,605,547-143,609,773 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000377579

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PYCRL-002 OTTHUMT00000347082.2

Summary

Transcript-based displays