Transcript: AP1S1-004 OTTHUMT00000347442.2

Description

adaptor-related protein complex 1, sigma 1 subunit

Location

About this transcript

This transcript has 5 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
AP1S1-001	OTTHUMT00000347439.1	1306	158aa	OTTHUMP00000211467	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47669	A0A024QYT6
AP1S1-004	OTTHUMT00000347442.2	573	191aa	OTTHUMP00000211469	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C1E4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
AP1S1-002	OTTHUMT00000347440.1	939	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
AP1S1-003	OTTHUMT00000347441.1	741	158aa	OTTHUMP00000211468	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS47669	A0A024QYT6

Summary

Statistics

Exons: 5 Transcript length: 573 bps Translation length: 191 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 13/02/2009)

Alternative symbols

RP4-747G18.2-004

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 101,154,525-101,160,537 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000429457

Curation Method

Manual annotation from Havana