Transcript: COX17-002 OTTHUMT00000355298.1

Description

COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)

Location

Chromosome 3: 119,660,095-119,677,454 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000159433 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
COX17-001	OTTHUMT00000355297.2	684	63aa	OTTHUMP00000215283	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2993	Q14061
COX17-006	OTTHUMT00000355302.2	660	63aa	OTTHUMP00000215287	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2993	Q14061
COX17-005	OTTHUMT00000355301.1	471	98aa	OTTHUMP00000215286	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	C9J8T6
COX17-002	OTTHUMT00000355298.1	555	63aa	OTTHUMP00000215284	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS2993	Q14061
COX17-007	OTTHUMT00000355376.2	513	45aa	OTTHUMP00000215360	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COX17-004	OTTHUMT00000355300.1	430	58aa	OTTHUMP00000215285	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C4E5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
COX17-003	OTTHUMT00000355299.1	565	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 555 bps Translation length: 63 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS2993

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 04/06/2009)

Alternative symbols

RP11-59M4.1-002

Other assemblies

This transcript maps to 119,660,095-119,677,454 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000468918

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: COX17-002 OTTHUMT00000355298.1

Summary

Transcript-based displays