Transcript: BDP1-019 OTTHUMT00000382835.1

Description

B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB

Location

About this transcript

This transcript has 14 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
BDP1-016	OTTHUMT00000374681.2	11073	2624aa	OTTHUMP00000224505	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43328	A6H8Y1
BDP1-020	OTTHUMT00000382834.1	5511	583aa	OTTHUMP00000229012	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H7C5U4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
BDP1-019	OTTHUMT00000382835.1	4997	606aa	OTTHUMP00000229013	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YCV8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
BDP1-018	OTTHUMT00000382833.1	7194	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
BDP1-015	OTTHUMT00000372653.5	3403	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 14 Transcript length: 4,997 bps Translation length: 606 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 27/04/2010)

Alternative symbols

RP11-1174L13.1-019

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 71,532,374-71,567,820 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000525844

Curation Method

Manual annotation from Havana