Transcript: RP11-347C12.1-005 OTTHUMT00000434106.1

Description

novel protein similar to nuclear pore complex-interacting protein-like 3

Location

About this transcript

This transcript has 7 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RP11-347C12.1-001	OTTHUMT00000374155.1	3584	1138aa	OTTHUMP00000224274	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81968	A6NJU9
RP11-347C12.1-003	OTTHUMT00000434107.1	570	84aa	OTTHUMP00000255270	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BQU5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RP11-347C12.1-005	OTTHUMT00000434106.1	797	68aa	OTTHUMP00000255269	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N5EDM5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RP11-347C12.1-004	OTTHUMT00000434108.1	543	40aa	OTTHUMP00000255271	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
RP11-347C12.1-002	OTTHUMT00000434109.1	519	49aa	OTTHUMP00000255272	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-

Summary

Statistics

Exons: 7 Transcript length: 797 bps Translation length: 68 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 15/09/2011)

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 30,225,603-30,235,516 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000562937

Curation Method

Manual annotation from Havana