Transcript: ESCO2-002 OTTHUMT00000376277.1

Description

establishment of cohesion 1 homolog 2 (S. cerevisiae)

Location

Chromosome 8: 27,774,554-27,812,640 forward strand.

About this transcript

This transcript has 12 exons and is annotated with 1 domain and feature.

Gene

This transcript is a product of gene OTTHUMG00000163901 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ESCO2-001	OTTHUMT00000376276.1	3922	601aa	OTTHUMP00000225318	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34872	Q56NI9
ESCO2-004	OTTHUMT00000376275.2	698	187aa	OTTHUMP00000225317	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RIE3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ESCO2-005	OTTHUMT00000376278.2	574	133aa	OTTHUMP00000225320	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RFP7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ESCO2-006	OTTHUMT00000376281.2	528	176aa	OTTHUMP00000225322	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
ESCO2-002	OTTHUMT00000376277.1	2503	290aa	OTTHUMP00000225319	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ESCO2-007	OTTHUMT00000376280.1	691	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ESCO2-003	OTTHUMT00000376279.1	3805	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,503 bps Translation length: 290 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 12/02/2010)

Alternative symbols

RP11-1149M3.1-002

Other assemblies

This transcript maps to 27,774,554-27,812,640 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000522378

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ESCO2-002 OTTHUMT00000376277.1

Summary

Transcript-based displays