Transcript: TRPA1-005 OTTHUMT00000379108.1

Description

transient receptor potential cation channel, subfamily A, member 1

Location

Chromosome 8: 72,038,766-72,046,545 reverse strand.

About this transcript

This transcript has 3 exons.

Gene

This transcript is a product of gene OTTHUMG00000164516 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TRPA1-001	OTTHUMT00000379079.2	5223	1119aa	OTTHUMP00000226879	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34908	O75762
TRPA1-002	OTTHUMT00000379077.1	2812	916aa	OTTHUMP00000226878	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YAW0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TRPA1-003	OTTHUMT00000379078.1	3449	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TRPA1-006	OTTHUMT00000379107.1	719	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TRPA1-007	OTTHUMT00000379106.2	484	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
TRPA1-004	OTTHUMT00000379109.1	583	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
TRPA1-005	OTTHUMT00000379108.1	366	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 366 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 15/03/2010)

Alternative symbols

RP11-367C12.2-005

Other assemblies

This transcript maps to 72,038,766-72,046,545 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000522271

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TRPA1-005 OTTHUMT00000379108.1

Summary

Transcript-based displays