Transcript: ARFGEF1-002 OTTHUMT00000379442.2

Description

ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)

Location

Chromosome 8: 67,299,314-67,343,677 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 2 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000164626 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ARFGEF1-001	OTTHUMT00000379441.4	7225	1849aa	OTTHUMP00000227052	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6199	A0A024R7X0
ARFGEF1-003	OTTHUMT00000379511.2	5882	1279aa	OTTHUMP00000227095	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RIF2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ARFGEF1-007	OTTHUMT00000379515.2	2734	825aa	OTTHUMP00000227097	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ARFGEF1-010	OTTHUMT00000380486.2	646	192aa	OTTHUMP00000281074	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ARFGEF1-002	OTTHUMT00000379442.2	571	118aa	OTTHUMP00000227053	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ARFGEF1-006	OTTHUMT00000379514.3	750	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARFGEF1-005	OTTHUMT00000379513.1	3179	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ARFGEF1-009	OTTHUMT00000380487.1	1235	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 571 bps Translation length: 118 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 17/03/2010)

Alternative symbols

RP11-446H10.2-002

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 67,299,314-67,343,677 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000519436

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ARFGEF1-002 OTTHUMT00000379442.2

Summary

Transcript-based displays