Transcript: PHRF1-003 OTTHUMT00000382134.1

Description

PHD and ring finger domains 1

Location

About this transcript

This transcript has 18 exons and is annotated with 31 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
PHRF1-001	OTTHUMT00000382133.1	5523	1649aa	OTTHUMP00000228597	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS65988	A0A024RCA1
PHRF1-008	OTTHUMT00000398149.1	5227	1648aa	OTTHUMP00000237922	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44507	-
PHRF1-007	OTTHUMT00000398148.1	5224	1647aa	OTTHUMP00000237921	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS65989	F8WEF5
PHRF1-003	OTTHUMT00000382134.1	5218	1645aa	OTTHUMP00000228598	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS65987	E9PJ24
PHRF1-002	OTTHUMT00000382135.2	7143	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PHRF1-004	OTTHUMT00000382132.1	5178	1494aa	OTTHUMP00000228596	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PHRF1-005	OTTHUMT00000382136.1	748	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 5,218 bps Translation length: 1,645 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS65987

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 20/04/2010)

Alternative symbols

RP11-496I9.2-003

Other assemblies

This transcript maps to 576,521-611,964 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000533464

Curation Method

Manual annotation from Havana