Transcript: BEST1-002 OTTHUMT00000394721.2

Description

bestrophin 1

Location

Chromosome 11: 61,950,370-61,965,515 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000167469 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
BEST1-002	OTTHUMT00000394721.2	4267	604aa	OTTHUMP00000235999	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44623	-
BEST1-001	OTTHUMT00000394715.1	2740	585aa	OTTHUMP00000235994	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31580	O76090
BEST1-004	OTTHUMT00000394716.2	1829	55aa	OTTHUMP00000235995	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PMB5
BEST1-006	OTTHUMT00000394722.1	1263	329aa	OTTHUMP00000236000	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B7Z1N8
BEST1-003	OTTHUMT00000394720.1	2404	435aa	OTTHUMP00000235998	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0C4DGE9
BEST1-005	OTTHUMT00000394719.1	5772	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
BEST1-008	OTTHUMT00000394717.2	1421	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
BEST1-007	OTTHUMT00000394718.2	1128	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 4,267 bps Translation length: 604 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS44623

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 24/08/2010)

Alternative symbols

RP11-810P12.4-002

Other assemblies

This transcript maps to 61,950,370-61,965,515 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000449131

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: BEST1-002 OTTHUMT00000394721.2

Summary

Transcript-based displays