Transcript: USP50-004 OTTHUMT00000395273.1

Description

ubiquitin specific peptidase 50

Location

About this transcript

This transcript has 4 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
USP50-001	OTTHUMT00000395249.1	1386	334aa	OTTHUMP00000236284	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS53944
USP50-002	OTTHUMT00000395250.1	1020	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
USP50-005	OTTHUMT00000418601.1	725	61aa	OTTHUMP00000248451	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
USP50-004	OTTHUMT00000395273.1	580	85aa	OTTHUMP00000236288	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
USP50-003	OTTHUMT00000395251.1	678	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-

Summary

Statistics

Exons: 4 Transcript length: 580 bps Translation length: 85 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 01/09/2010)

Alternative symbols

RP11-562A8.2-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 50,513,410-50,538,836 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000529349

Curation Method

Manual annotation from Havana