Transcript: LRP6-006 OTTHUMT00000400139.1

Description

low density lipoprotein receptor-related protein 6

Location

Chromosome 12: 12,121,047-12,131,830 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000168540 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LRP6-001	OTTHUMT00000400137.1	10020	1613aa	OTTHUMP00000238979	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS8647	O75581
LRP6-004	OTTHUMT00000400140.1	4774	1568aa	OTTHUMP00000238982	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F5H7J9
LRP6-006	OTTHUMT00000400139.1	593	69aa	OTTHUMP00000238981	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRP6-002	OTTHUMT00000400143.2	562	75aa	OTTHUMP00000238983	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LRP6-003	OTTHUMT00000400138.1	7812	1478aa	OTTHUMP00000238980	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YGW5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LRP6-005	OTTHUMT00000400141.1	473	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LRP6-007	OTTHUMT00000400142.1	435	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 593 bps Translation length: 69 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 09/11/2010)

Alternative symbols

RP11-267J23.3-006

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 12,121,047-12,131,830 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000626957 ENST00000540527

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LRP6-006 OTTHUMT00000400139.1

Summary

Transcript-based displays