Transcript: CHERP-003 OTTHUMT00000403372.1

Description

calcium homeostasis endoplasmic reticulum protein

Location

Chromosome 19: 16,517,896-16,542,415 reverse strand.

About this transcript

This transcript has 17 exons and is annotated with 26 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000169304 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
CHERP-001	OTTHUMT00000403371.1	4173	916aa	OTTHUMP00000240723	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS42518	Q8IWX8
CHERP-003	OTTHUMT00000403372.1	4084	927aa	OTTHUMP00000240724	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QK89
CHERP-002	OTTHUMT00000403374.1	1735	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CHERP-005	OTTHUMT00000403373.1	1755	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CHERP-004	OTTHUMT00000403375.1	1429	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CHERP-006	OTTHUMT00000403376.1	886	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CHERP-008	OTTHUMT00000461118.1	674	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CHERP-007	OTTHUMT00000461119.1	554	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 17 Transcript length: 4,084 bps Translation length: 927 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 16/12/2010)

Alternative symbols

CTD-3222D19.1-003

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 16,517,896-16,542,415 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000198939

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CHERP-003 OTTHUMT00000403372.1

Summary

Transcript-based displays