Transcript: HVCN1-007 OTTHUMT00000404655.3

Description

hydrogen voltage-gated channel 1

Location

Chromosome 12: 110,651,218-110,689,809 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 13 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000169530 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
HVCN1-001	OTTHUMT00000404653.1	2189	273aa	OTTHUMP00000241455	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31900	Q96D96
HVCN1-003	OTTHUMT00000404652.1	1634	273aa	OTTHUMP00000241454	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31900	Q96D96
HVCN1-004	OTTHUMT00000404654.1	1215	253aa	OTTHUMP00000241456	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58278	-
HVCN1-002	OTTHUMT00000404651.1	1301	255aa	OTTHUMP00000241453	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
HVCN1-007	OTTHUMT00000404655.3	829	214aa	OTTHUMP00000241457	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8VPF7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HVCN1-006	OTTHUMT00000404657.2	539	78aa	OTTHUMP00000241459	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HVCN1-008	OTTHUMT00000404656.1	441	79aa	OTTHUMP00000241458	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
HVCN1-005	OTTHUMT00000404658.1	788	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 829 bps Translation length: 214 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 13/01/2011)

Alternative symbols

RP11-481J8.1-007

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 110,651,218-110,689,809 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000549442

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HVCN1-007 OTTHUMT00000404655.3

Summary

Transcript-based displays