Transcript: PTPRQ-001 OTTHUMT00000383962.3

Description

protein tyrosine phosphatase, receptor type, Q

Location

Chromosome 12: 80,444,168-80,680,234 forward strand.

About this transcript

This transcript has 45 exons and is annotated with 100 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000170171 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PTPRQ-001	OTTHUMT00000383962.3	8289	2299aa	OTTHUMP00000229692	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73501	A0A087WZU1
PTPRQ-006	OTTHUMT00000383997.3	2336	332aa	OTTHUMP00000229709	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PTPRQ-007	OTTHUMT00000407746.2	1700	353aa	OTTHUMP00000243105	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PTPRQ-008	OTTHUMT00000407747.1	1097	283aa	OTTHUMP00000243106	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PTPRQ-005	OTTHUMT00000407752.2	439	146aa	OTTHUMP00000243108	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YIJ5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
PTPRQ-009	OTTHUMT00000479144.1	1078	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PTPRQ-002	OTTHUMT00000407750.1	604	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PTPRQ-003	OTTHUMT00000407751.1	829	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PTPRQ-004	OTTHUMT00000407753.1	567	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 45 Transcript length: 8,289 bps Translation length: 2,299 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS73501

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 11/05/2010)

Alternative symbols

RP11-272K23.1-001

Annotation Attributes

inferred exon combination [Definitions]

Remarks

CAGE supported TSS

Other assemblies

This transcript maps to 80,444,168-80,680,234 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000614701

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PTPRQ-001 OTTHUMT00000383962.3

Summary

Transcript-based displays