Transcript: LTBP2-002 OTTHUMT00000413596.1

Description

latent transforming growth factor beta binding protein 2

Location

Chromosome 14: 74,500,411-74,612,378 reverse strand.

About this transcript

This transcript has 36 exons and is annotated with 154 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000171476 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LTBP2-001	OTTHUMT00000413595.1	8567	1821aa	OTTHUMP00000246131	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9831	Q14767
LTBP2-003	OTTHUMT00000413598.1	5614	1777aa	OTTHUMP00000246133	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3V3X5
LTBP2-007	OTTHUMT00000413599.2	699	233aa	OTTHUMP00000246134	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YJ20	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
LTBP2-004	OTTHUMT00000413600.2	582	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
LTBP2-002	OTTHUMT00000413596.1	6462	1769aa	OTTHUMP00000246132	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3V511
LTBP2-005	OTTHUMT00000413601.1	582	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
LTBP2-006	OTTHUMT00000413597.1	863	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 36 Transcript length: 6,462 bps Translation length: 1,769 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 20/04/2011)

Alternative symbols

RP3-449M8.8-002

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 74,500,411-74,612,378 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000553939

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: LTBP2-002 OTTHUMT00000413596.1

Summary

Transcript-based displays