Description
low density lipoprotein receptor
Location
Chromosome 19: 11,105,307-11,113,624 forward strand.
About this transcript
This transcript has 6 exons and is annotated with 42 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000171935 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| LDLR-003 | OTTHUMT00000415973.2 | 3617 | 860aa | OTTHUMP00000247210 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS12254 | P01130 | |
| LDLR-002 | OTTHUMT00000415972.1 | 3144 | 858aa | OTTHUMP00000247209 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58651 | - | |
| LDLR-001 | OTTHUMT00000415969.1 | 2768 | 819aa | OTTHUMP00000247206 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56085 | - | |
| LDLR-006 | OTTHUMT00000415970.1 | 2429 | 682aa | OTTHUMP00000247207 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56083 | - | |
| LDLR-007 | OTTHUMT00000415976.1 | 2333 | 692aa | OTTHUMP00000247212 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56084 | - | |
| LDLR-004 | OTTHUMT00000415974.1 | 5337 | 945aa | OTTHUMP00000247211 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KMZ9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| LDLR-012 | OTTHUMT00000416141.1 | 2941 | 948aa | OTTHUMP00000247310 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YMD1 | |
| LDLR-011 | OTTHUMT00000416142.2 | 928 | 309aa | OTTHUMP00000247311 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YM92 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| LDLR-005 | OTTHUMT00000415971.2 | 2656 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| LDLR-015 | OTTHUMT00000416156.1 | 605 | 170aa | OTTHUMP00000247314 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| LDLR-014 | OTTHUMT00000416149.1 | 535 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| LDLR-009 | OTTHUMT00000415992.1 | 1881 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LDLR-008 | OTTHUMT00000415991.1 | 509 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LDLR-010 | OTTHUMT00000416143.1 | 456 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| LDLR-013 | OTTHUMT00000416148.1 | 389 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
