Transcript: NPTX1-001 OTTHUMT00000438051.1

Description

neuronal pentraxin I

Location

About this transcript

This transcript has 5 exons and is annotated with 20 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
NPTX1-001	OTTHUMT00000438051.1	5122	432aa	OTTHUMP00000257225	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32762	Q15818
NPTX1-003	OTTHUMT00000438049.1	6177	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
NPTX1-004	OTTHUMT00000438053.1	472	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
NPTX1-002	OTTHUMT00000438050.1	3957	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
NPTX1-005	OTTHUMT00000438052.1	556	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 5,122 bps Translation length: 432 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32762

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 07/11/2011)

Alternative symbols

CTD-2526A2.3-001

Other assemblies

This transcript maps to 80,467,148-80,476,604 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000306773

Curation Method

Manual annotation from Havana