Transcript: TSR1-007 OTTHUMT00000438601.2

Description

TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)

Location

About this transcript

This transcript has 6 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
TSR1-002	OTTHUMT00000438180.2	5188	804aa	OTTHUMP00000257288	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32525	Q2NL82
TSR1-007	OTTHUMT00000438601.2	1290	368aa	OTTHUMP00000257497	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	I3L1Q5
TSR1-004	OTTHUMT00000438183.1	794	70aa	OTTHUMP00000257289	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TSR1-005	OTTHUMT00000438181.3	387	53aa	OTTHUMP00000258652	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
TSR1-001	OTTHUMT00000438184.1	573	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,290 bps Translation length: 368 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 11/11/2011)

Alternative symbols

RP5-1037N22.1-007

Other assemblies

This transcript maps to 2,333,390-2,336,457 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000576112

Curation Method

Manual annotation from Havana