Transcript: SLC9A3R1-002 OTTHUMT00000443672.2

Description

solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1

Location

About this transcript

This transcript has 5 exons and is annotated with 11 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SLC9A3R1-001	OTTHUMT00000443671.1	1969	358aa	OTTHUMP00000260210	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11705	O14745
SLC9A3R1-002	OTTHUMT00000443672.2	1285	202aa	OTTHUMP00000265268	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SLC9A3R1-006	OTTHUMT00000443670.2	841	215aa	OTTHUMP00000260209	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QRP6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SLC9A3R1-003	OTTHUMT00000443675.1	3676	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SLC9A3R1-005	OTTHUMT00000443674.1	519	35aa	OTTHUMP00000260211	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3QRA3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SLC9A3R1-004	OTTHUMT00000443673.1	714	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,285 bps Translation length: 202 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 27/01/2012)

Alternative symbols

RP11-452I5.1-002

Other assemblies

This transcript maps to 74,762,003-74,769,296 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000413388

Curation Method

Manual annotation from Havana