Transcript: CASKIN2-003 OTTHUMT00000447610.1

Description

CASK interacting protein 2

Location

Chromosome 17: 75,500,809-75,509,888 reverse strand.

About this transcript

This transcript has 19 exons and is annotated with 57 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000179683 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CASKIN2-001	OTTHUMT00000447609.1	5015	1202aa	OTTHUMP00000262101	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11723	Q8WXE0
CASKIN2-003	OTTHUMT00000447610.1	3950	1120aa	OTTHUMP00000262102	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45775	-
CASKIN2-002	OTTHUMT00000447612.1	1612	323aa	OTTHUMP00000262103	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
CASKIN2-008	OTTHUMT00000447615.3	530	25aa	OTTHUMP00000262104	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CASKIN2-004	OTTHUMT00000447608.1	2202	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CASKIN2-007	OTTHUMT00000447611.1	626	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CASKIN2-005	OTTHUMT00000447613.1	557	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CASKIN2-006	OTTHUMT00000447614.1	350	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 3,950 bps Translation length: 1,120 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45775

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 23/07/2014 (Created on 09/03/2012)

Alternative symbols

CTD-2589J4.2-003

Other assemblies

This transcript maps to 75,500,809-75,509,888 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000433559

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: CASKIN2-003 OTTHUMT00000447610.1

Summary

Transcript-based displays