Transcript: NPHS1-001 OTTHUMT00000452553.1

Description

nephrosis 1, congenital, Finnish type (nephrin)

Location

About this transcript

This transcript has 29 exons and is annotated with 64 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
NPHS1-001	OTTHUMT00000452553.1	4276	1241aa	OTTHUMP00000264967	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32996	O60500
NPHS1-002	OTTHUMT00000452554.2	3741	1201aa	OTTHUMP00000264968	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
NPHS1-005	OTTHUMT00000468179.1	581	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
NPHS1-003	OTTHUMT00000452555.2	999	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
NPHS1-004	OTTHUMT00000452556.1	561	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 29 Transcript length: 4,276 bps Translation length: 1,241 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32996

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 27/04/2012)

Alternative symbols

AC002133.1-001

Other assemblies

This transcript maps to 35,825,964-35,851,837 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000378910

Curation Method

Manual annotation from Havana