Transcript: VAT1-007 OTTHUMT00000453108.2

Description

vesicle amine transport protein 1 homolog (T. californica)

Location

Chromosome 17: 43,018,122-43,019,027 reverse strand.

About this transcript

This transcript has 2 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000180816 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
VAT1-001	OTTHUMT00000453101.1	2734	393aa	OTTHUMP00000265364	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11451	Q99536
VAT1-003	OTTHUMT00000453103.1	1174	325aa	OTTHUMP00000265366	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
VAT1-002	OTTHUMT00000453104.1	1069	259aa	OTTHUMP00000265367	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
VAT1-005	OTTHUMT00000453106.2	613	154aa	OTTHUMP00000265369	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7EM19	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
VAT1-004	OTTHUMT00000453109.2	600	146aa	OTTHUMP00000265372	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7ERT7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
VAT1-008	OTTHUMT00000453105.1	582	125aa	OTTHUMP00000265368	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7ESA3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
VAT1-006	OTTHUMT00000453107.2	570	151aa	OTTHUMP00000265370	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7ENX2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
VAT1-007	OTTHUMT00000453108.2	521	92aa	OTTHUMP00000265371	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7ER81	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
VAT1-009	OTTHUMT00000453102.1	478	30aa	OTTHUMP00000265365	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 2 Transcript length: 521 bps Translation length: 92 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 08/05/2012)

Alternative symbols

RP11-376M2.5-007

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 43,018,122-43,019,027 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000589828

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: VAT1-007 OTTHUMT00000453108.2

Summary

Transcript-based displays