Transcript: ALDH1A3-001 OTTHUMT00000313620.2

Description

aldehyde dehydrogenase 1 family, member A3

Location

Chromosome 15: 100,879,376-100,916,626 forward strand.

About this transcript

This transcript has 13 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000186439 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ALDH1A3-001	OTTHUMT00000313620.2	3924	512aa	OTTHUMP00000194835	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10389	A0A024RC95
ALDH1A3-004	OTTHUMT00000416658.1	3104	405aa	OTTHUMP00000247572	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76794	H0Y2X5
ALDH1A3-006	OTTHUMT00000416655.1	1670	102aa	OTTHUMP00000247571	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ALDH1A3-007	OTTHUMT00000416653.3	571	144aa	OTTHUMP00000247570	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YKF9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ALDH1A3-005	OTTHUMT00000416657.1	1855	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ALDH1A3-002	OTTHUMT00000416654.1	891	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ALDH1A3-008	OTTHUMT00000416659.1	713	141aa	OTTHUMP00000247573	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YNQ3
ALDH1A3-003	OTTHUMT00000416656.1	576	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ALDH1A3-009	OTTHUMT00000416660.1	586	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 3,924 bps Translation length: 512 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10389

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 06/11/2006)

Alternative symbols

AC015712.1-001

Other assemblies

This transcript maps to 100,879,376-100,916,626 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000329841

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ALDH1A3-001 OTTHUMT00000313620.2

Summary

Transcript-based displays