Transcript: MMP28-004 OTTHUMT00000477065.1

Description

matrix metallopeptidase 28

Location

Chromosome 17: 35,766,340-35,795,624 reverse strand.

About this transcript

This transcript has 9 exons and is annotated with 27 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000188387 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
MMP28-004	OTTHUMT00000477065.1	2033	393aa	OTTHUMP00000276487	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76996	C0H5X0
MMP28-005	OTTHUMT00000477064.1	1928	520aa	OTTHUMP00000276486	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS74036	Q9H239
MMP28-003	OTTHUMT00000477068.1	1092	130aa	OTTHUMP00000276489	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45651	-
MMP28-008	OTTHUMT00000477066.2	567	189aa	OTTHUMP00000276488	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087X1Y9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
MMP28-002	OTTHUMT00000477062.1	436	89aa	OTTHUMP00000276484	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WZ56	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
MMP28-001	OTTHUMT00000477063.1	2336	510aa	OTTHUMP00000276485	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	B3KV06
MMP28-007	OTTHUMT00000477067.1	696	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 2,033 bps Translation length: 393 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS76996

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 18/03/2014 (Created on 18/03/2014)

Alternative symbols

AC006237.5-004

Remarks

alternative 3' UTR

Other assemblies

This transcript maps to 35,766,340-35,795,624 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000615136

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: MMP28-004 OTTHUMT00000477065.1

Summary

Transcript-based displays