Transcript: AATF-001 OTTHUMT00000477299.1

Description

apoptosis antagonizing transcription factor

Location

Chromosome 17: 36,948,875-37,056,871 forward strand.

About this transcript

This transcript has 12 exons and is annotated with 9 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000188458 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
AATF-001	OTTHUMT00000477299.1	2141	560aa	OTTHUMP00000276646	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32632	Q9NY61
AATF-006	OTTHUMT00000477301.1	601	154aa	OTTHUMP00000276648	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WWS8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AATF-007	OTTHUMT00000477302.1	502	98aa	OTTHUMP00000276649	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WTH8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
AATF-005	OTTHUMT00000477300.1	648	55aa	OTTHUMP00000276647	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
AATF-003	OTTHUMT00000477306.1	507	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AATF-004	OTTHUMT00000477305.1	376	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
AATF-002	OTTHUMT00000477307.1	2044	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AATF-009	OTTHUMT00000477304.1	586	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
AATF-008	OTTHUMT00000477303.1	474	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,141 bps Translation length: 560 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32632

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 19/03/2014 (Created on 19/03/2014)

Alternative symbols

CTC-268N12.1-001

Other assemblies

This transcript maps to 36,948,875-37,056,871 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000619387

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: AATF-001 OTTHUMT00000477299.1

Summary

Transcript-based displays