Transcript: DDX52-003 OTTHUMT00000477386.1

Description

DEAD (Asp-Glu-Ala-Asp) box polypeptide 52

Location

Chromosome 17: 37,619,768-37,643,446 reverse strand.

About this transcript

This transcript has 12 exons and is annotated with 1 domain and feature.

Gene

This transcript is a product of gene OTTHUMG00000188475 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
DDX52-001	OTTHUMT00000477383.1	6362	599aa	OTTHUMP00000276689	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11323	Q9Y2R4
DDX52-004	OTTHUMT00000477384.1	3123	112aa	OTTHUMP00000276690	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
DDX52-005	OTTHUMT00000477382.1	2951	115aa	OTTHUMP00000276688	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
DDX52-003	OTTHUMT00000477386.1	2027	97aa	OTTHUMP00000276691	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
DDX52-007	OTTHUMT00000477388.1	776	101aa	OTTHUMP00000276692	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
DDX52-006	OTTHUMT00000477385.1	3550	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
DDX52-002	OTTHUMT00000477389.1	1872	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
DDX52-008	OTTHUMT00000477387.1	572	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,027 bps Translation length: 97 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 19/03/2014 (Created on 19/03/2014)

Alternative symbols

AC004099.4-003

Other assemblies

This transcript maps to 37,619,768-37,643,446 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000612255

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: DDX52-003 OTTHUMT00000477386.1

Summary

Transcript-based displays