Transcript: LIMS3-005 OTTHUMT00000470145.1

Description

LIM and senescent cell antigen-like domains 3

Location

About this transcript

This transcript has 3 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
LIMS3-001	OTTHUMT00000253922.2	1220	117aa	OTTHUMP00000161843	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS2084	P0CW20
LIMS3-008	OTTHUMT00000486993.3	1197	398aa	OTTHUMP00000280609	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YXC7
LIMS3-004	OTTHUMT00000330159.2	782	55aa	OTTHUMP00000280610	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0J9YYC1
LIMS3-006	OTTHUMT00000486889.2	1580	248aa	OTTHUMP00000280569	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
LIMS3-003	OTTHUMT00000330158.1	690	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
LIMS3-005	OTTHUMT00000470145.1	626	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 626 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 13/02/2013)

Alternative symbols

AC013271.2-005

Remarks

Note that the supporting evidence is not BIG as it has an equal scoring alignement downstream

Other assemblies

This transcript maps to 109,898,670-109,914,635 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000479168

Curation Method

Manual annotation from Havana